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shr00mie/jupyterlab_install.sh

Last active July 20, 2019 10:41
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Revisions

  1. shr00mie revised this gist Mar 20, 2018. 2 changed files with 115 additions and 84 deletions.
    84 changes: 0 additions & 84 deletions jupyter_install.sh
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    Original file line number Diff line number Diff line change
    @@ -1,84 +0,0 @@
    #!/bin/bash

    # variables
    read -p $'
    \e[32mServer static IP address\e[m: ' ipAddress

    echo -e "\n...\e[32mGenerating random token\e[m..."
    token=$(cat /dev/urandom | tr -dc 'a-zA-Z0-9' | fold -w 30 | head -n 1)

    echo -e "\n...\e[32mAdding Jonathon F Python 3.6 PPA\e[m..."
    sudo add-apt-repository ppa:jonathonf/python-3.6

    echo -e "\n...\e[32mUpdating system\e[m..."
    sudo apt update && sudo apt upgrade -y

    echo -e "\n...\e[32mInstalling python 3.6, python 3.6 dev, and python-pip\e[m..."
    sudo apt install python3.6 python3.6-dev python-pip -y

    echo -e "\n...\e[32mInstall Cleanup\e[m..."
    sudo apt autoclean && sudo apt autoremove -y

    echo -e "\n...\e[32mUpgrading pip\e[m..."
    sudo -H pip install --upgrade pip

    echo -e "\n...\e[32mInstalling Jupyter\e[m..."
    sudo -H pip install jupyter

    echo -e "\n...\e[32mGenerating jupyter config file\e[m..."
    jupyter-notebook --generate-config

    echo -e "\n...\e[32mTweaking config file\e[m..."
    # allow connections from other devices
    # listen on static IP
    # don't open browser on start
    # set port
    # set token
    sudo sed -i.back "s/#c.NotebookApp.allow_origin = ''/c.NotebookApp.allow_origin = '*'/ ; s/#c.NotebookApp.ip = 'localhost'/c.NotebookApp.ip = '$ipAddress'/ ; s/#c.NotebookApp.open_browser = True/c.NotebookApp.open_browser = False/ ; s/#c.NotebookApp.port = 8888/c.NotebookApp.port = 8888/ ; s/#c.NotebookApp.token = '<generated>'/c.NotebookApp.token = '$token'/" ~/.jupyter/jupyter_notebook_config.py

    echo -e "\n...\e[32mCreating service user for Jupyter Notebook service\e[m..."
    sudo adduser -q --system --shell /usr/sbin/nologin --group JupyterNotebook

    echo -e "\n...\e[32mCreating Jupyter Notebook service\e[m..."
    cat << EOF | sudo tee /etc/systemd/system/jupyter.service
    [Unit]
    Description=Jupyter Notebook Service
    [Service]
    Type=simple
    PIDFile=/run/jupyter.pid
    ExecStart=/usr/local/bin/jupyter-notebook --config=/home/JupyterNotebook/.jupyter/jupyter_notebook_config.py
    User=JupyterNotebook
    Group=JupyterNotebook
    Restart=always
    RestartSec=10
    #KillMode=mixed
    [Install]
    WantedBy=multi-user.target
    EOF

    echo -e "\n...\e[32mCopying Jupyter Notebook configuration to service user home directory\e[m..."
    sudo mkdir /home/JupyterNotebook/.jupyter
    sudo cp ~/.jupyter/jupyter_notebook_config.py /home/JupyterNotebook/.jupyter/jupyter_notebook_config.py
    sudo chown JupyterNotebook:JupyterNotebook /home/JupyterNotebook/.jupyter
    sudo chown JupyterNotebook:JupyterNotebook /home/JupyterNotebook/.jupyter/jupyter_notebook_config.py


    echo -e "\n...\e[32mReloading systemctl daemon after creating service entry\e[m..."
    sudo systemctl daemon-reload

    echo -e "\n...\e[32mEnabling Jupyter Notebook service\e[m..."
    sudo systemctl enable jupyter.service

    echo -e "\n...\e[32mStarting Jupyter Notebook service\e[m..."
    sudo systemctl start jupyter.service

    echo -e "\n...\e[32mChecking status of Jupyter Notebook service\e[m..."
    sudo systemctl status jupyter.service

    echo -e "\n...\e[32mCopy the below entry and paste it into your Atom configuration file under \"Hydrogen:\"\e[m..."
    echo "gateways: \"[{ \"name\" : \"Jupiter Notebook - Ubuntu Server 16.04\" , \"options\" : { \"baseUrl\" : \"http://$ipAddress:8888\" , \"token\" : \"$token\" } }]\""

    echo -e "\n...\e[32mYou should be able to test the installation by opening a browser and opening the below URL\e[m..."
    echo "http://$ipAddress:8888/?token=$token/"
    115 changes: 115 additions & 0 deletions jupyterlab_install.sh
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    @@ -0,0 +1,115 @@
    #!/bin/bash

    # variables
    # listening address for jupyter. set to localhost if only accessing locally.
    read -p $'\n\e[32mServer static IP address\e[m: ' ipAddress

    # Set this either as parent or direct working directory of the project you want to work on.
    read -p $'\n\e[32mProject Parent Directory\e[m: ' WorkingDirectory

    echo -e "\n...\e[32mGenerating random token\e[m...\n"
    token=$(cat /dev/urandom | tr -dc 'a-zA-Z0-9' | fold -w 35 | head -n 1)

    echo -e "\n...\e[32mUpdating system\e[m...\n"
    sudo apt update && sudo apt upgrade -y

    echo -e "\n...\e[32mAdding Nodejs 9.x repository\e[m...\n"
    wget https://gist.githubusercontent.com/shr00mie/8473a7f885316dba7f4ac39ca5b13874/raw/fed1b63626ebee6dbc66bacbe0525e5fec4d1aea/nodejs-9x-install.sh
    chmod u+x nodejs-9x-install.sh
    sudo ./nodejs-9x-install.sh

    echo -e "\n...\e[32mInstalling python3, python3-dev, python3-pip, and nodejs\e[m...\n"
    sudo apt install python3 python3-dev python3-pip nodejs -y

    echo -e "\n...\e[32mInstalling NVM\e[m...\n"
    curl -o- https://raw.githubusercontent.com/creationix/nvm/v0.33.8/install.sh | bash

    echo -e "\n...\e[32mInstall Cleanup\e[m...\n"
    sudo apt autoclean && sudo apt autoremove -y
    rm nodejs-9x-install.sh

    echo -e "\n...\e[32mUpgrading pip\e[m...\n"
    pip3 install -U pip

    echo -e "\n...\e[32mInstalling dependencies\e[m...\n"
    pip3 install --user autopep8 pylama beautysh websocket-client pymongo mongoengine bintrees requests

    echo -e "\n...\e[32mInstalling Jupyter Lab & enabling jupyterlab server extension\e[m...\n"
    pip3 install --user jupyterlab
    jupyter serverextension enable --py jupyterlab

    echo -e "\n...\e[32mAdding update alias to ~/.bashrc\e[m...\n"
    cat << EOF | sudo tee -a /home/$USER/.bashrc
    # ALIASES
    alias update='sudo apt update && sudo apt upgrade -y'
    # PATH
    export PATH=/home/$USER/.local/bin:$PATH
    EOF

    echo -e "\n...\e[32mGenerating jupyter config file\e[m...\n"
    jupyter-lab --generate-config

    echo -e "\n...\e[32mTweaking config file\e[m...\n"
    # allow connections from other devices
    # listen on static IP
    # don't open browser on start
    # set port
    # set token

    # Configuration
    # Incoming connection whitelist. tried with IP & CIDR. not sure about ranges. should be comma separated if more than one.
    sed -i.back "s/#c.NotebookApp.allow_origin = ''/c.NotebookApp.allow_origin = '10.1.0.0\/24'/" ~/.jupyter/jupyter_notebook_config.py
    # Jupyter listening IP. Set to localhost if only planning on using locally.
    sed -i "s/#c.NotebookApp.ip = 'localhost'/c.NotebookApp.ip = '$ipAddress'/" ~/.jupyter/jupyter_notebook_config.py
    # Whether or not to open browser on jupyter launch. If headless, or server, set to False.
    sed -i "s/#c.NotebookApp.open_browser = True/c.NotebookApp.open_browser = False/" ~/.jupyter/jupyter_notebook_config.py
    # Listening port. Change as necessary
    sed -i "s/#c.NotebookApp.port = 8888/c.NotebookApp.port = 8888/" ~/.jupyter/jupyter_notebook_config.py
    # Randomly generated token for access without user/pass
    sed -i "s/^#c.NotebookApp.token .*/c.NotebookApp.token = '$token'/" ~/.jupyter/jupyter_notebook_config.py

    # Trash Cleanup
    sed -i "s/#c.NotebookApp.cookie_secret = b''/#c.NotebookApp.cookie_secret = ''/" ~/.jupyter/jupyter_notebook_config.py
    sed -i "s/#c.Session.key = b''/#c.Session.key = ''/" ~/.jupyter/jupyter_notebook_config.py
    sed -i "s/#c.NotebookNotary.secret = b''/#c.NotebookNotary.secret = ''/" ~/.jupyter/jupyter_notebook_config.py

    echo -e "\n...\e[32mCreating Jupyter Lab service\e[m...\n"
    cat << EOF | sudo tee /etc/systemd/system/jupyter-lab.service
    [Unit]
    Description=Jupyter Lab
    [Service]
    Type=simple
    PIDFile=/run/jupyter.pid
    ExecStart=/home/$USER/.local/bin/jupyter-lab --config=/home/$USER/.jupyter/jupyter_notebook_config.py
    WorkingDirectory=$WorkingDirectory
    User=$USER
    Group=$USER
    Restart=always
    RestartSec=10
    #KillMode=mixed
    [Install]
    WantedBy=multi-user.target
    EOF

    echo -e "\n...\e[32mReloading systemctl daemon after creating service entry\e[m...\n"
    sudo systemctl daemon-reload

    echo -e "\n...\e[32mEnabling Jupyter Lab service\e[m...\n"
    sudo systemctl enable jupyter-lab.service

    echo -e "\n...\e[32mStarting Jupyter Lab service\e[m...\n"
    sudo systemctl start jupyter-lab.service

    echo -e "\n...\e[32mChecking status of Jupyter Lab service\e[m...\n"
    sudo systemctl status jupyter-lab.service

    echo -e "\n...\e[32mAtom Hydrogen gateway configuration\e[m...\n"
    echo "[{\"name\":\"Jupiter Lab - Ubuntu Server 16.04\",\"options\":{\"baseUrl\":\"http://$ipAddress:8888\",\"token\":\"$token\"}}]"

    echo -e "\n...\e[32mYou should be able to test the installation by opening a browser and opening the below URL\e[m...\n"
    echo "http://$ipAddress:8888/?token=$token/"
  2. shr00mie created this gist Mar 16, 2018.
    84 changes: 84 additions & 0 deletions jupyter_install.sh
    View file
    Original file line number Diff line number Diff line change
    @@ -0,0 +1,84 @@
    #!/bin/bash

    # variables
    read -p $'
    \e[32mServer static IP address\e[m: ' ipAddress

    echo -e "\n...\e[32mGenerating random token\e[m..."
    token=$(cat /dev/urandom | tr -dc 'a-zA-Z0-9' | fold -w 30 | head -n 1)

    echo -e "\n...\e[32mAdding Jonathon F Python 3.6 PPA\e[m..."
    sudo add-apt-repository ppa:jonathonf/python-3.6

    echo -e "\n...\e[32mUpdating system\e[m..."
    sudo apt update && sudo apt upgrade -y

    echo -e "\n...\e[32mInstalling python 3.6, python 3.6 dev, and python-pip\e[m..."
    sudo apt install python3.6 python3.6-dev python-pip -y

    echo -e "\n...\e[32mInstall Cleanup\e[m..."
    sudo apt autoclean && sudo apt autoremove -y

    echo -e "\n...\e[32mUpgrading pip\e[m..."
    sudo -H pip install --upgrade pip

    echo -e "\n...\e[32mInstalling Jupyter\e[m..."
    sudo -H pip install jupyter

    echo -e "\n...\e[32mGenerating jupyter config file\e[m..."
    jupyter-notebook --generate-config

    echo -e "\n...\e[32mTweaking config file\e[m..."
    # allow connections from other devices
    # listen on static IP
    # don't open browser on start
    # set port
    # set token
    sudo sed -i.back "s/#c.NotebookApp.allow_origin = ''/c.NotebookApp.allow_origin = '*'/ ; s/#c.NotebookApp.ip = 'localhost'/c.NotebookApp.ip = '$ipAddress'/ ; s/#c.NotebookApp.open_browser = True/c.NotebookApp.open_browser = False/ ; s/#c.NotebookApp.port = 8888/c.NotebookApp.port = 8888/ ; s/#c.NotebookApp.token = '<generated>'/c.NotebookApp.token = '$token'/" ~/.jupyter/jupyter_notebook_config.py

    echo -e "\n...\e[32mCreating service user for Jupyter Notebook service\e[m..."
    sudo adduser -q --system --shell /usr/sbin/nologin --group JupyterNotebook

    echo -e "\n...\e[32mCreating Jupyter Notebook service\e[m..."
    cat << EOF | sudo tee /etc/systemd/system/jupyter.service
    [Unit]
    Description=Jupyter Notebook Service
    [Service]
    Type=simple
    PIDFile=/run/jupyter.pid
    ExecStart=/usr/local/bin/jupyter-notebook --config=/home/JupyterNotebook/.jupyter/jupyter_notebook_config.py
    User=JupyterNotebook
    Group=JupyterNotebook
    Restart=always
    RestartSec=10
    #KillMode=mixed
    [Install]
    WantedBy=multi-user.target
    EOF

    echo -e "\n...\e[32mCopying Jupyter Notebook configuration to service user home directory\e[m..."
    sudo mkdir /home/JupyterNotebook/.jupyter
    sudo cp ~/.jupyter/jupyter_notebook_config.py /home/JupyterNotebook/.jupyter/jupyter_notebook_config.py
    sudo chown JupyterNotebook:JupyterNotebook /home/JupyterNotebook/.jupyter
    sudo chown JupyterNotebook:JupyterNotebook /home/JupyterNotebook/.jupyter/jupyter_notebook_config.py


    echo -e "\n...\e[32mReloading systemctl daemon after creating service entry\e[m..."
    sudo systemctl daemon-reload

    echo -e "\n...\e[32mEnabling Jupyter Notebook service\e[m..."
    sudo systemctl enable jupyter.service

    echo -e "\n...\e[32mStarting Jupyter Notebook service\e[m..."
    sudo systemctl start jupyter.service

    echo -e "\n...\e[32mChecking status of Jupyter Notebook service\e[m..."
    sudo systemctl status jupyter.service

    echo -e "\n...\e[32mCopy the below entry and paste it into your Atom configuration file under \"Hydrogen:\"\e[m..."
    echo "gateways: \"[{ \"name\" : \"Jupiter Notebook - Ubuntu Server 16.04\" , \"options\" : { \"baseUrl\" : \"http://$ipAddress:8888\" , \"token\" : \"$token\" } }]\""

    echo -e "\n...\e[32mYou should be able to test the installation by opening a browser and opening the below URL\e[m..."
    echo "http://$ipAddress:8888/?token=$token/"