Created
April 30, 2013 15:05
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blast 2.2.28 fails to build OS10.8.3
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| HOMEBREW_VERSION: 0.9.4 | |
| ORIGIN: https://github.com/mxcl/homebrew.git | |
| HEAD: 41d4ae5b0d021c3c92039a147c594d699f6c968b | |
| HOMEBREW_PREFIX: /usr/local | |
| HOMEBREW_CELLAR: /usr/local/Cellar | |
| CPU: quad-core 64-bit sandybridge | |
| OS X: 10.8.3-x86_64 | |
| Xcode: 4.6.2 | |
| CLT: 4.6.0.0.1.1365549073 | |
| GCC-4.2: build 5666 | |
| LLVM-GCC: build 2336 | |
| Clang: 4.2 build 425 | |
| X11: 2.7.4 => /opt/X11 | |
| System Ruby: 1.8.7-358 | |
| Perl: /usr/bin/perl | |
| Python: /usr/bin/python | |
| Ruby: /usr/bin/ruby => /System/Library/Frameworks/Ruby.framework/Versions/1.8/usr/bin/ruby |
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| ==> ./configure --prefix=/usr/local/Cellar/blast/2.2.28 --with-dll | |
| ./configure --prefix=/usr/local/Cellar/blast/2.2.28 --with-dll | |
| configure: loading site script ./src/build-system/config.site | |
| configure: creating cache config.cache | |
| checking build system type... i686-apple-darwin12.3.0 | |
| checking host system type... i686-apple-darwin12.3.0 | |
| checking for a BSD-compatible install... /usr/bin/install -c | |
| checking for gcc... cc | |
| checking for C compiler default output file name... a.out | |
| checking whether the C compiler works... yes | |
| checking whether we are cross compiling... no | |
| checking for suffix of executables... | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether cc accepts -g... yes | |
| checking for cc option to accept ANSI C... none needed | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether c++ accepts -g... yes | |
| adjusted C compiler: /usr/local/Library/ENV/4.3/cc | |
| adjusted C++ compiler: /usr/local/Library/ENV/4.3/c++ | |
| checking whether /usr/local/Library/ENV/4.3/cc supports -Wl,-rpath... yes | |
| checking whether this system supports --with(out)-64... yes | |
| checking whether ln -s works... yes | |
| checking for ranlib... ranlib | |
| checking for ar... ar cr | |
| checking ranlib's effectiveness... neutral | |
| checking for ccache... no | |
| checking for tail... /usr/bin/tail | |
| checking whether /usr/bin/tail accepts modern syntax (-n N)... yes | |
| checking for touch... /usr/bin/touch | |
| checking for egrep... grep -E | |
| checking how to run grep -E quietly... grep -E -q | |
| checking for valgrind... no | |
| checking how to run the C++ preprocessor... /usr/local/Library/ENV/4.3/c++ -E | |
| checking for ANSI C header files... rm: conftest.dSYM: is a directory | |
| rm: conftest.dSYM: is a directory | |
| yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking for size_t... yes | |
| checking for size_t... (cached) yes | |
| checking size of size_t... 8 | |
| checking for amq... no | |
| checking whether /usr/local/Library/ENV/4.3/cc supports -Wl,--no-allow-shlib-undefined... no | |
| checking how to run the C preprocessor... /usr/local/Library/ENV/4.3/cc -E | |
| checking whether cross-directory hard links work... yes | |
| checking iostream usability... yes | |
| checking iostream presence... yes | |
| checking for iostream... yes | |
| checking iostream.h usability... yes | |
| checking iostream.h presence... yes | |
| checking for iostream.h... yes | |
| checking fstream usability... yes | |
| checking fstream presence... yes | |
| checking for fstream... yes | |
| checking fstream.h usability... yes | |
| checking fstream.h presence... yes | |
| checking for fstream.h... yes | |
| checking strstream usability... yes | |
| checking strstream presence... yes | |
| checking for strstream... yes | |
| checking strstream.h usability... no | |
| checking strstream.h presence... no | |
| checking for strstream.h... no | |
| checking strstrea.h usability... no | |
| checking strstrea.h presence... no | |
| checking for strstrea.h... no | |
| checking for inttypes.h... (cached) yes | |
| checking limits usability... yes | |
| checking limits presence... yes | |
| checking for limits... yes | |
| checking for unistd.h... (cached) yes | |
| checking windows.h usability... no | |
| checking windows.h presence... no | |
| checking for windows.h... no | |
| checking for wstring... yes | |
| checking for socklen_t... yes | |
| checking atomic.h usability... no | |
| checking atomic.h presence... no | |
| checking for atomic.h... no | |
| checking dlfcn.h usability... yes | |
| checking dlfcn.h presence... yes | |
| checking for dlfcn.h... yes | |
| checking ieeefp.h usability... no | |
| checking ieeefp.h presence... no | |
| checking for ieeefp.h... no | |
| checking poll.h usability... yes | |
| checking poll.h presence... yes | |
| checking for poll.h... yes | |
| checking sys/epoll.h usability... no | |
| checking sys/epoll.h presence... no | |
| checking for sys/epoll.h... no | |
| checking sys/mount.h usability... yes | |
| checking sys/mount.h presence... yes | |
| checking for sys/mount.h... yes | |
| checking sys/sockio.h usability... yes | |
| checking sys/sockio.h presence... yes | |
| checking for sys/sockio.h... yes | |
| checking sys/statvfs.h usability... yes | |
| checking sys/statvfs.h presence... yes | |
| checking for sys/statvfs.h... yes | |
| checking sys/sysinfo.h usability... no | |
| checking sys/sysinfo.h presence... no | |
| checking for sys/sysinfo.h... no | |
| checking sys/vfs.h usability... no | |
| checking sys/vfs.h presence... no | |
| checking for sys/vfs.h... no | |
| checking arpa/inet.h usability... yes | |
| checking arpa/inet.h presence... yes | |
| checking for arpa/inet.h... yes | |
| checking errno.h usability... yes | |
| checking errno.h presence... yes | |
| checking for errno.h... yes | |
| checking malloc.h usability... no | |
| checking malloc.h presence... no | |
| checking for malloc.h... no | |
| checking netdb.h usability... yes | |
| checking netdb.h presence... yes | |
| checking for netdb.h... yes | |
| checking netinet/in.h usability... yes | |
| checking netinet/in.h presence... yes | |
| checking for netinet/in.h... yes | |
| checking netinet/tcp.h usability... yes | |
| checking netinet/tcp.h presence... yes | |
| checking for netinet/tcp.h... yes | |
| checking paths.h usability... yes | |
| checking paths.h presence... yes | |
| checking for paths.h... yes | |
| checking signal.h usability... yes | |
| checking signal.h presence... yes | |
| checking for signal.h... yes | |
| checking sys/ioctl.h usability... yes | |
| checking sys/ioctl.h presence... yes | |
| checking for sys/ioctl.h... yes | |
| checking sys/select.h usability... yes | |
| checking sys/select.h presence... yes | |
| checking for sys/select.h... yes | |
| checking sys/socket.h usability... yes | |
| checking sys/socket.h presence... yes | |
| checking for sys/socket.h... yes | |
| checking sys/time.h usability... yes | |
| checking sys/time.h presence... yes | |
| checking for sys/time.h... yes | |
| checking wchar.h usability... yes | |
| checking wchar.h presence... yes | |
| checking for wchar.h... yes | |
| checking whether time.h and sys/time.h may both be included... yes | |
| checking for gethostbyname_r... no | |
| checking for gethostbyaddr_r... no | |
| checking for getservbyname_r... no | |
| checking for getpwuid_r... 5 | |
| checking for getlogin_r... yes | |
| checking for localtime_r... yes | |
| checking for pthread_setconcurrency... yes | |
| checking for pthread_atfork... yes | |
| checking return type of localtime_r... struct | |
| checking whether pthread mutexes are available... yes | |
| checking for vprintf... yes | |
| checking for _doprnt... no | |
| checking for euidaccess... no | |
| checking for atoll... yes | |
| checking for basename... yes | |
| checking for lchown... yes | |
| checking for fseeko... yes | |
| checking for getpagesize... yes | |
| checking for getpass... yes | |
| checking for getpassphrase... no | |
| checking for getpwuid... yes | |
| checking for getrusage... yes | |
| checking for gettimeofday... yes | |
| checking for getuid... yes | |
| checking for memrchr... no | |
| checking for readpassphrase... yes | |
| checking for readv... yes | |
| checking for usleep... yes | |
| checking for asprintf... yes | |
| checking for vasprintf... yes | |
| checking for vsnprintf... yes | |
| checking for select... yes | |
| checking for statfs... yes | |
| checking for statvfs... yes | |
| checking for strcasecmp... yes | |
| checking for strlcat... yes | |
| checking for strlcpy... yes | |
| checking for strdup... yes | |
| checking for strndup... yes | |
| checking for strtok_r... yes | |
| checking for sysmp... no | |
| checking for timegm... yes | |
| checking for utimes... yes | |
| checking for lutimes... yes | |
| checking for writev... yes | |
| checking return type of signal handlers... void | |
| checking whether select updates the timeout when interrupted... no | |
| checking whether strcasecmp treats letters as lowercase... yes | |
| checking for Linux-like sysinfo with 1 arg... no | |
| checking for getloadavg... yes | |
| checking for readdir_r... 3 | |
| checking for an ANSI C-conforming const... yes | |
| checking whether byte ordering is bigendian... no | |
| checking whether char is unsigned... no | |
| checking for char... yes | |
| checking size of char... 1 | |
| checking for double... yes | |
| checking size of double... 8 | |
| checking for float... yes | |
| checking size of float... 4 | |
| checking for int... yes | |
| checking size of int... 4 | |
| checking for long... yes | |
| checking size of long... 8 | |
| checking for long double... yes | |
| checking size of long double... 16 | |
| checking for long long... yes | |
| checking size of long long... 8 | |
| checking for short... yes | |
| checking size of short... 2 | |
| checking for void*... yes | |
| checking size of void*... 8 | |
| checking for __int64... no | |
| checking size of __int64... 0 | |
| checking for intptr_t... yes | |
| checking for uintptr_t... yes | |
| checking for struct sockaddr_in.sin_len... yes | |
| checking for struct tm.tm_zone... yes | |
| checking for struct tm.__tm_zone... no | |
| checking whether function prototypes can use throw(...)... yes | |
| checking for obsolete string::compare() syntax... no | |
| checking whether the auto_ptr template class works... yes | |
| checking for min/max templates... yes | |
| checking whether new C++ streams have ios_base::... yes | |
| checking for ios(_base)::register_callback... yes | |
| checking for std::char_traits::... yes | |
| checking for std::is_sorted<> in <algorithm>... no | |
| checking for SysV semaphores... yes | |
| checking for union semun... yes | |
| checking which way the stack grows... down | |
| checking whether the preprocessor supports C99-style variadic macros... yes | |
| checking whether the preprocessor supports GNU-style variadic macros... yes | |
| checking syntax for marking deprecated functions... __attribute__((__deprecated__)) | |
| checking how to force inlining... inline __attribute__((always_inline)) | |
| checking whether the C compiler supports __attribute__((destructor))... yes | |
| checking whether /usr/local/Library/ENV/4.3/cc supports __attribute__((visibility("default")))... (cached) unnecessary | |
| checking whether the C compiler supports C99 restrict... restrict | |
| checking whether the C++ compiler supports C99 restrict... __restrict__ | |
| checking syntax for marking functions that never return... __attribute__((__noreturn__)) | |
| checking syntax for declaring thread-local variables... __thread | |
| checking whether FIONBIO requires BSD_COMP to be defined... no | |
| checking whether INADDR_NONE is defined... yes | |
| checking whether unaligned reads are permissible... yes | |
| checking whether /usr/local/Library/ENV/4.3/c++ supports C++0x nullptr... no | |
| checking whether in-house NCBI resources are available... no | |
| checking for gethostbyname in -lnsl... no | |
| checking for connect in -lsocket... no | |
| checking for res_search in -lresolv... yes | |
| checking for inet_ntoa_r... no | |
| checking for getaddrinfo... yes | |
| checking for getnameinfo... yes | |
| checking for freehostent... yes | |
| checking for gethostent_r... no | |
| checking for getipnodebyaddr... yes | |
| checking for getipnodebyname... yes | |
| checking for inet_ntop... yes | |
| checking for erf... yes | |
| checking for library containing kstat_open... no | |
| checking for library containing rstat... no | |
| checking for library containing setkey... none required | |
| checking for library containing dlopen... none required | |
| checking for library containing uuid_generate... none required | |
| checking for library containing fuse_loop... -lfuse | |
| checking for library containing clock_gettime... no | |
| checking for library containing cplus_demangle... no | |
| checking for nanosleep... yes | |
| checking for sched_yield... yes | |
| checking for library containing iconv... (cached) -liconv | |
| checking for iconv declaration... | |
| extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); | |
| checking for libz... yes | |
| checking for libbz2... yes | |
| checking for liblzo2... no | |
| checking for libpcre... yes | |
| checking for libgcrypt-config... no | |
| checking for libgcrypt... yes | |
| checking for libgnutls-config... no | |
| checking for libgnutls... yes | |
| checking for libssl... yes | |
| checking for krb5-config... /usr/bin/krb5-config | |
| checking for libgssapi_krb5... yes | |
| checking for libcurl... yes | |
| checking for Sybase in ... no | |
| checking for FreeTDS in ... no | |
| checking for mysql_config... no | |
| checking for Berkeley DB libraries in /BerkeleyDB... no | |
| checking for python... /usr/bin/python | |
| checking for usable Python 2.7 libraries... yes | |
| checking for python2.3... no | |
| checking for python2.4... no | |
| checking for python2.5... /usr/bin/python2.5 | |
| checking for usable Python 2.5 libraries... yes | |
| checking for perl... /usr/bin/perl | |
| checking for usable Perl libraries... yes | |
| checking Boost version... 1_49 | |
| checking for Boost library name tag... -xgcc42-1_49-64 (autodetected) | |
| checking for Boost.Regex in /boost... no | |
| checking for Boost.Spirit in /boost... yes | |
| checking for Boost.System in /boost... no | |
| checking for Boost.Test in /boost... included-only | |
| checking for Boost.Threads in /boost... no | |
| checking for the NCBI C toolkit in ... no | |
| checking for X... disabled | |
| checking for XextCreateExtension in -lXext... no | |
| checking for XtMainLoop in -lXt... no | |
| checking for XmuMakeAtom in -lXmu... no | |
| checking for OpenGL... yes | |
| checking for OSMesaCreateContext in -lOSMesa... no | |
| checking for glutInit in -lglut... no | |
| checking for library containing glewGetExtension... no | |
| checking for wx-config... no | |
| checking for wxWidgets in /wxwidgets... no | |
| checking for FastCGI libraries in /fcgi-current... no | |
| checking for FCGX_Accept_r... no | |
| checking for NCBI SSS directories in /sss/BUILD... no | |
| checking for SP directories in /SP... no | |
| checking for ORBacus in /corba/OB-4.0.1... no | |
| checking for ICU in /icu... no | |
| checking for libexpat... yes | |
| checking for libsablot... no | |
| checking for libxml2... yes | |
| checking for libxslt... yes | |
| checking for xsltproc... /usr/bin/xsltproc | |
| checking for libexslt... yes | |
| checking for Xerces-C++... no | |
| checking for Xalan-C++... no | |
| checking for Zorba... no | |
| checking for libsqlite3... yes | |
| checking sqlite3async.h usability... no | |
| checking sqlite3async.h presence... no | |
| checking for sqlite3async.h... no | |
| checking for sqlite3_unlock_notify... no | |
| checking for liboechem... no | |
| checking for libdrmaa... no | |
| checking for libmuparser... no | |
| checking for libhdf5_cpp... no | |
| checking for libjpeg... yes | |
| checking for libpng... yes | |
| checking for libtiff... yes | |
| checking for libungif... no | |
| checking for libgif... no | |
| checking for libXpm in .... no | |
| checking for freetype-config... no | |
| checking for libftgl... no | |
| checking for libmagic... no | |
| checking for libmimetic... no | |
| configure: looking for configurables below /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++... | |
| configure: ...done | |
| updating cache config.cache | |
| configure: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/config.status | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/api/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/blastinput/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/blastinput/unit_test/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/composition_adjustment/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/core/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/dbindex/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/dbindex/makeindex/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/format/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/igblast/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/unit_tests/api/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/unit_tests/blast_format/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/unit_tests/blastdb/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/unit_tests/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/blast/unit_tests/seqdb_reader/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/dustmask/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/segmask/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/algo/winmask/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/app/blast/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/app/blastdb/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/app/dustmasker/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/app/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/app/segmasker/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/app/winmasker/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/check.cfg | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/config.h | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/install.sh | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.app | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.app.tmpl | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.both | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.dll | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/build-system/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.is_dll_support | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.meta | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.mk | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.null | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.rules | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.rules_with_autodep | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.top_builddir | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/new_module.sh | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/build-system/project_tree_builder/Makefile | |
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| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/objects/pub/Makefile | |
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| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/objects/taxon3/Makefile | |
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| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc/ncbiconf_unix.h | |
| config.status: executing default commands | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/corelib/ncbicfg.c is updated | |
| Prebuilt project_tree_builder not found | |
| =============================================================================== | |
| NCBI C++ Toolkit documentation: doc/index.html, doc/config.html#ref_Running | |
| For the available configuration flags run: ./configure --help | |
| CFLAGS = -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common | |
| CXXFLAGS = -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common | |
| CPPFLAGS = -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT | |
| LDFLAGS = -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:$(libdir)/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:$(libdir)/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:$(libdir)/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:$(libdir)/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:$(libdir)/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:$(libdir)/libncbi_xreader_pubseqos.dylib -g | |
| LIBRARIES: build as dynamic by default | |
| FEATURES: GCC LFS DLL DLL_BUILD unix WinMain Darwin | |
| PACKAGES: | |
| enabled: UUID FUSE Z BZ2 PCRE GCRYPT GNUTLS OPENSSL KRB5 CURL PYTHON PYTHON25 PERL Boost.Spirit Boost.Test.Included OpenGL EXPAT LIBXML LIBXSLT LIBEXSLT SQLITE3 JPEG PNG TIFF | |
| disabled: LocalZ LocalBZ2 LZO LocalPCRE Sybase DBLib FreeTDS MySQL BerkeleyDB BerkeleyDB++ ODBC PYTHON23 PYTHON24 Boost.Regex Boost.System Boost.Test Boost.Threads C-Toolkit MESA GLUT GLEW wxWidgets wx2.8 Fast-CGI LocalSSS LocalMSGMAIL2 SSSUTILS LocalNCBILS NCBILS2 SSSDB SP ORBacus ICU SABLOT Xerces Xalan Zorba SQLITE3ASYNC OECHEM SGE MUPARSER HDF5 UNGIF GIF XPM FreeType FTGL MAGIC MIMETIC | |
| PROJECTS: | |
| enabled: cgi local_lbsm connext ncbi_crypt serial objects dbapi app algo | |
| disabled: bdb ctools gui gbench | |
| Tools / flags / paths: /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.mk | |
| Configuration header: /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc/ncbiconf_unix.h | |
| To build everything: cd /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build && make all_r | |
| or simply run make in the current directory | |
| ******* CONFIGURATION SUCCESSFUL ******* | |
| ==> make | |
| make | |
| if test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.flat; then \ | |
| cd /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build && /usr/bin/make -f Makefile.flat; \ | |
| elif test -s ""; then \ | |
| cd /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build && /usr/bin/make - --jobserver-fds=3,5 -j all_p; \ | |
| else \ | |
| cd /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build && /usr/bin/make - --jobserver-fds=3,5 -j all_r; \ | |
| fi | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/db/Makefile.in] Error 1 (ignored) | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/ctools/Makefile.in] Error 1 (ignored) | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/misc/Makefile.in] Error 1 (ignored) | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/gui/Makefile.in] Error 1 (ignored) | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/ctools/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/ctools/Makefile.in` | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/db/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/db/Makefile.in` | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/gui/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/gui/Makefile.in` | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/misc/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/misc/Makefile.in` | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/db/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/db/Makefile.in | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/misc/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/misc/Makefile.in | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/gui/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/gui/Makefile.in | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/ctools/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/ctools/Makefile.in | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 db/Makefile | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 ctools/Makefile | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/sample/Makefile.in] Error 1 (ignored) | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/internal/Makefile.in] Error 1 (ignored) | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/sample/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/sample/Makefile.in` | |
| make[1]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/internal/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/internal/Makefile.in` | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/internal/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/internal/Makefile.in | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/sample/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/sample/Makefile.in | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 misc/Makefile | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 gui/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/ctools/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/db/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/misc/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/gui/Makefile | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 sample/Makefile | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 internal/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/sample/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/internal/Makefile | |
| /usr/bin/make -C corelib -j --jobserver-fds=3,5 all_r || exit 5 | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/test/Makefile.in] Error 1 (ignored) | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/test/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/test/Makefile.in` | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/test/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/test/Makefile.in | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 test/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/corelib/test/Makefile | |
| /usr/bin/make[3] (Makefile.precompile): Nothing to be done for `all'. | |
| /usr/bin/make[2] (Makefile.corelib.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make[2] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make[2] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib TMPL=corelib -j --jobserver-fds=3,5 all | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_toolkit.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbierror.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/perf_log.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_autoinit.cpp. | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/interprocess_lock.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/resource_info.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_strings.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/expr.cpp. | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/request_control.cpp. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/request_ctx.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/version.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/syslog.cpp. | |
| brew: superenv removed: -m64 | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/stream_utils.cpp. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/rwstreambuf.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/plugin_manager_store.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/plugin_manager.cpp. | |
| brew: superenv removed: -m64 | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/obj_store.cpp. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbitime.cpp. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbithr.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbistre.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbistr.cpp. | |
| brew: superenv removed: -m64 | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbireg.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbiobj.cpp. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbimtx.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbimempool.cpp. | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbifile.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbiexpt.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbiexec.cpp. | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbienv.cpp. | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbidll.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbidiag_p.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbidiag.cpp. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbidbg.cpp. | |
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| Updating dependency information for ncbicfg.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbiatomic.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbiargs.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbiapp.cpp. | |
| brew: superenv removed: -m64 | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_system.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_stack.cpp. | |
| brew: superenv removed: -m64 | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_signal.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_safe_static.cpp. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_process.cpp. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_param.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_config.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/metareg.cpp. | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/env_reg.cpp. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ddumpable.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/blob_storage.cpp. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/blob_storage.cpp -o blob_storage.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ddumpable.cpp -o ddumpable.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/env_reg.cpp -o env_reg.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/metareg.cpp -o metareg.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_config.cpp -o ncbi_config.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_param.cpp -o ncbi_param.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_process.cpp -o ncbi_process.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_safe_static.cpp -o ncbi_safe_static.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_signal.cpp -o ncbi_signal.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_stack.cpp -o ncbi_stack.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_system.cpp -o ncbi_system.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbiargs.cpp -o ncbiargs.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbiatomic.cpp -o ncbiatomic.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbidbg.cpp -o ncbidbg.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbidiag_p.cpp -o ncbidiag_p.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbiexpt.cpp -o ncbiexpt.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbifile.cpp -o ncbifile.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbimempool.cpp -o ncbimempool.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbiobj.cpp -o ncbiobj.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbireg.cpp -o ncbireg.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbistr.cpp -o ncbistr.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbistre.cpp -o ncbistre.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbithr.cpp -o ncbithr.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbitime.cpp -o ncbitime.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/obj_store.cpp -o obj_store.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/plugin_manager.cpp -o plugin_manager.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/plugin_manager_store.cpp -o plugin_manager_store.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/rwstreambuf.cpp -o rwstreambuf.o | |
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| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_strings.c -o ncbi_strings.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/resource_info.cpp -o resource_info.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/interprocess_lock.cpp -o interprocess_lock.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_autoinit.cpp -o ncbi_autoinit.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/perf_log.cpp -o perf_log.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbi_toolkit.cpp -o ncbi_toolkit.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/ncbierror.cpp -o ncbierror.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /bin/rm -f libxncbi.dylib .libxncbi.dylib.stamp | |
| /usr/local/Library/ENV/4.3/c++ -m64 -dynamiclib -install_name /usr/local/Cellar/blast/2.2.28/lib/libxncbi.dylib -o libxncbi.dylib -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_pubseqos.dylib -g -undefined suppress blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o -Wl,-rpath,/usr/local/Cellar/blast/2.2.28/lib -L/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib -lm -Wl,-framework,ApplicationServices | |
| brew: superenv removed: -m64 -m64 -g | |
| /bin/sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/if_diff.sh ln -f libxncbi.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib | |
| ln -f libxncbi.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libxncbi.dylib | |
| ln -f .xncbi.dep /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/.xncbi.dep | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib TMPL=test_mt -j --jobserver-fds=3,5 all | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/test_mt.cpp. | |
| brew: superenv removed: -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/test_mt.cpp -o test_mt.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /bin/rm -f libtest_mt.dylib .libtest_mt.dylib.stamp | |
| /usr/local/Library/ENV/4.3/c++ -m64 -dynamiclib -install_name /usr/local/Cellar/blast/2.2.28/lib/libtest_mt.dylib -o libtest_mt.dylib -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_pubseqos.dylib -g -undefined suppress test_mt.o -Wl,-rpath,/usr/local/Cellar/blast/2.2.28/lib -L/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib -lm -Wl,-framework,ApplicationServices | |
| brew: superenv removed: -m64 -m64 -g | |
| /bin/sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/if_diff.sh ln -f libtest_mt.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib | |
| ln -f libtest_mt.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libtest_mt.dylib | |
| ln -f .test_mt.dep /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/.test_mt.dep | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib TMPL=test_boost -j --jobserver-fds=3,5 all | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/test_boost.cpp. | |
| brew: superenv removed: -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include -DBOOST_DISABLE_THREADS /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/corelib/test_boost.cpp -o test_boost.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /bin/rm -f libtest_boost.dylib .libtest_boost.dylib.stamp | |
| /usr/local/Library/ENV/4.3/c++ -m64 -dynamiclib -install_name /usr/local/Cellar/blast/2.2.28/lib/libtest_boost.dylib -o libtest_boost.dylib -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_pubseqos.dylib -g -undefined suppress test_boost.o -Wl,-rpath,/usr/local/Cellar/blast/2.2.28/lib -L/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib -lm -Wl,-framework,ApplicationServices | |
| brew: superenv removed: -m64 -m64 -g | |
| /bin/sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/if_diff.sh ln -f libtest_boost.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib | |
| ln -f libtest_boost.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libtest_boost.dylib | |
| ln -f .test_boost.dep /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/.test_boost.dep | |
| /usr/bin/make -C test -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make -C util -j --jobserver-fds=3,5 all_r || exit 5 | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/qparse/Makefile.in] Error 1 (ignored) | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/test/Makefile.in] Error 1 (ignored) | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/demo/Makefile.in] Error 1 (ignored) | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/image/Makefile.in] Error 1 (ignored) | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/test/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/test/Makefile.in` | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/demo/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/demo/Makefile.in` | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/image/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/image/Makefile.in` | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/qparse/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/qparse/Makefile.in` | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/qparse/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/qparse/Makefile.in | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/image/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/image/Makefile.in | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/demo/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/demo/Makefile.in | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/test/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/test/Makefile.in | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 image/Makefile | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 qparse/Makefile | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 test/Makefile | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 demo/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/util/test/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/util/qparse/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/util/demo/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/util/image/Makefile | |
| /usr/bin/make[2] (Makefile.util.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util TMPL=util -j --jobserver-fds=3,5 all | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/util_misc.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/ncbi_url.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/distribution.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/scheduler.cpp. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/thread_pool_ctrl.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/thread_pool.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/itransaction.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/multi_writer.cpp. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/uttp.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/util_exception.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/line_reader.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/ncbi_cache.cpp. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/random_gen.cpp -o random_gen.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/utf8.cpp -o utf8.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/checksum.cpp -o checksum.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bytesrc.cpp -o bytesrc.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/itree.cpp -o itree.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/smalldns.cpp -o smalldns.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/thread_pool_old.cpp -o thread_pool_old.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/ddump_viewer.cpp -o ddump_viewer.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/strsearch.cpp -o strsearch.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/logrotate.cpp -o logrotate.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/format_guess.cpp -o format_guess.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/ascii85.cpp -o ascii85.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/md5.cpp -o md5.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/file_obsolete.cpp -o file_obsolete.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/unicode.cpp -o unicode.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/dictionary.cpp -o dictionary.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/dictionary_util.cpp -o dictionary_util.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/thread_nonstop.cpp -o thread_nonstop.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sgml_entity.cpp -o sgml_entity.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/static_set.cpp -o static_set.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/transmissionrw.cpp -o transmissionrw.o | |
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| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/miscmath.c -o miscmath.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/mutex_pool.cpp -o mutex_pool.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/ncbi_cache.cpp -o ncbi_cache.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/line_reader.cpp -o line_reader.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/util_exception.cpp -o util_exception.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/uttp.cpp -o uttp.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/multi_writer.cpp -o multi_writer.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/itransaction.cpp -o itransaction.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/thread_pool.cpp -o thread_pool.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/thread_pool_ctrl.cpp -o thread_pool_ctrl.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/scheduler.cpp -o scheduler.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/distribution.cpp -o distribution.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/util_misc.cpp -o util_misc.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/ncbi_url.cpp -o ncbi_url.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /bin/rm -f libxutil.dylib .libxutil.dylib.stamp | |
| /usr/local/Library/ENV/4.3/c++ -m64 -dynamiclib -install_name /usr/local/Cellar/blast/2.2.28/lib/libxutil.dylib -o libxutil.dylib -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_pubseqos.dylib -g -undefined suppress random_gen.o utf8.o checksum.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o util_misc.o ncbi_url.o -Wl,-rpath,/usr/local/Cellar/blast/2.2.28/lib -L/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib -lm -Wl,-framework,ApplicationServices | |
| brew: superenv removed: -m64 -m64 -g | |
| /bin/sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/if_diff.sh ln -f libxutil.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib | |
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| /usr/bin/make -C regexp -j --jobserver-fds=3,5 all_r || exit 5 | |
| NOTE: Skipping project regexp due to unmet requirements: | |
| LocalPCRE | |
| /usr/bin/make -C xregexp -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make[3] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/xregexp TMPL=xregexp -j --jobserver-fds=3,5 all | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/xregexp/arg_regexp.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/xregexp/mask_regexp.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/xregexp/regexp.cpp. | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/xregexp/regexp.cpp -o regexp.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/xregexp/arg_regexp.cpp -o arg_regexp.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/xregexp/mask_regexp.cpp -o mask_regexp.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /bin/rm -f libxregexp.dylib .libxregexp.dylib.stamp | |
| /usr/local/Library/ENV/4.3/c++ -m64 -dynamiclib -install_name /usr/local/Cellar/blast/2.2.28/lib/libxregexp.dylib -o libxregexp.dylib -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_pubseqos.dylib -g -undefined suppress regexp.o arg_regexp.o mask_regexp.o -Wl,-rpath,/usr/local/Cellar/blast/2.2.28/lib -L/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib -lpcre | |
| brew: superenv removed: -m64 -m64 -g | |
| /bin/sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/if_diff.sh ln -f libxregexp.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib | |
| ln -f libxregexp.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libxregexp.dylib | |
| ln -f .xregexp.dep /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/.xregexp.dep | |
| /usr/bin/make -C compress -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make -C bzip2 -j --jobserver-fds=3,5 all_r || exit 5 | |
| NOTE: Skipping project bzip2 due to unmet requirements: | |
| LocalBZ2 | |
| /usr/bin/make -C zlib -j --jobserver-fds=3,5 all_r || exit 5 | |
| NOTE: Skipping project zlib due to unmet requirements: | |
| LocalZ | |
| /usr/bin/make -C api -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api TMPL=compress -j --jobserver-fds=3,5 all | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/reader_zlib.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/tar.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/lzo.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/zlib.cpp. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/bzip2.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/stream_util.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/streambuf.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/stream.cpp. | |
| brew: superenv removed: -m64 | |
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| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/compress.cpp. | |
| brew: superenv removed: -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/compress.cpp -o compress.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/stream.cpp -o stream.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/streambuf.cpp -o streambuf.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/stream_util.cpp -o stream_util.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/bzip2.cpp -o bzip2.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/zlib.cpp -o zlib.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/lzo.cpp -o lzo.o | |
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| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/compress/api/tar.cpp -o tar.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /bin/rm -f libxcompress.dylib .libxcompress.dylib.stamp | |
| /usr/local/Library/ENV/4.3/c++ -m64 -dynamiclib -install_name /usr/local/Cellar/blast/2.2.28/lib/libxcompress.dylib -o libxcompress.dylib -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_pubseqos.dylib -g -undefined suppress compress.o stream.o streambuf.o stream_util.o bzip2.o zlib.o lzo.o reader_zlib.o tar.o -Wl,-rpath,/usr/local/Cellar/blast/2.2.28/lib -L/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib -lbz2 -lz | |
| brew: superenv removed: -m64 -m64 -g | |
| /bin/sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/if_diff.sh ln -f libxcompress.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib | |
| ln -f libxcompress.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libxcompress.dylib | |
| ln -f .xcompress.dep /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/.xcompress.dep | |
| /usr/bin/make -C image -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make -C tables -j --jobserver-fds=3,5 all_r || exit 5 | |
| make[3]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/tables/test/Makefile.in] Error 1 (ignored) | |
| make[3]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/tables/test/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/tables/test/Makefile.in` | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/tables/test/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/tables/test/Makefile.in | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 test/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/util/tables/test/Makefile | |
| /usr/bin/make[3] (Makefile.tables.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/tables TMPL=tables -j --jobserver-fds=3,5 all | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/tables/raw_scoremat.c. | |
| brew: superenv removed: -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /bin/rm -f libtables.dylib .libtables.dylib.stamp | |
| /usr/local/Library/ENV/4.3/c++ -m64 -dynamiclib -install_name /usr/local/Cellar/blast/2.2.28/lib/libtables.dylib -o libtables.dylib -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_pubseqos.dylib -g -undefined suppress raw_scoremat.o -Wl,-rpath,/usr/local/Cellar/blast/2.2.28/lib -L/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib -lm -Wl,-framework,ApplicationServices | |
| brew: superenv removed: -m64 -m64 -g | |
| /bin/sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/if_diff.sh ln -f libtables.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib | |
| ln -f libtables.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libtables.dylib | |
| ln -f .tables.dep /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/.tables.dep | |
| /usr/bin/make -C test -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make -C creaders -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make[3] (Makefile.creaders.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/creaders TMPL=creaders -j --jobserver-fds=3,5 all | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/creaders/alnread.c. | |
| brew: superenv removed: -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/creaders/alnread.c -o alnread.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /bin/rm -f libcreaders.dylib .libcreaders.dylib.stamp | |
| /usr/local/Library/ENV/4.3/c++ -m64 -dynamiclib -install_name /usr/local/Cellar/blast/2.2.28/lib/libcreaders.dylib -o libcreaders.dylib -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_pubseqos.dylib -g -undefined suppress alnread.o -Wl,-rpath,/usr/local/Cellar/blast/2.2.28/lib -L/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib -lm -Wl,-framework,ApplicationServices | |
| brew: superenv removed: -m64 -m64 -g | |
| /bin/sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/if_diff.sh ln -f libcreaders.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib | |
| ln -f libcreaders.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libcreaders.dylib | |
| ln -f .creaders.dep /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/.creaders.dep | |
| /usr/bin/make -C sequtil -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make[3] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil TMPL=sequtil -j --jobserver-fds=3,5 all | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil_shared.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil_manip.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil_convert_imp.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil_tables.cpp. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil_convert.cpp. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil.cpp. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil.cpp -o sequtil.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/c++ -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /bin/rm -f libsequtil.dylib .libsequtil.dylib.stamp | |
| /usr/local/Library/ENV/4.3/c++ -m64 -dynamiclib -install_name /usr/local/Cellar/blast/2.2.28/lib/libsequtil.dylib -o libsequtil.dylib -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_pubseqos.dylib -g -undefined suppress sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath,/usr/local/Cellar/blast/2.2.28/lib -L/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib -lm -Wl,-framework,ApplicationServices | |
| brew: superenv removed: -m64 -m64 -g | |
| /bin/sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/if_diff.sh ln -f libsequtil.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib | |
| ln -f libsequtil.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libsequtil.dylib | |
| ln -f .sequtil.dep /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/.sequtil.dep | |
| /usr/bin/make -C bitset -j --jobserver-fds=3,5 all_r || exit 5 | |
| make[3]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bitset/test/Makefile.in] Error 1 (ignored) | |
| make[3]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bitset/demo/Makefile.in] Error 1 (ignored) | |
| make[3]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bitset/demo/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bitset/demo/Makefile.in` | |
| make[3]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bitset/test/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bitset/test/Makefile.in` | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bitset/test/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bitset/test/Makefile.in | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bitset/demo/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/util/bitset/demo/Makefile.in | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 test/Makefile | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 demo/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/util/bitset/test/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/util/bitset/demo/Makefile | |
| /usr/bin/make -C test -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make -C demo -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make -C qparse -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make -C test -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make -C demo -j --jobserver-fds=3,5 all_r || exit 5 | |
| /usr/bin/make -C connect -j --jobserver-fds=3,5 all_r || exit 5 | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/services/Makefile.in] Error 1 (ignored) | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/test/Makefile.in] Error 1 (ignored) | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/daemons/Makefile.in] Error 1 (ignored) | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/test/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/test/Makefile.in` | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/daemons/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/daemons/Makefile.in` | |
| make[2]: [/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/services/Makefile.in] Error 1 (ignored) | |
| /bin/mkdir -p `dirname /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/services/Makefile.in` | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/daemons/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/daemons/Makefile.in | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/test/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/test/Makefile.in | |
| test -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/services/Makefile.in || /bin/cp -p /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/build-system/Makefile.in.skel /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/services/Makefile.in | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 test/Makefile | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 daemons/Makefile | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/update_configurable.sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64 services/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/connect/services/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/connect/test/Makefile | |
| config.status: creating /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/connect/daemons/Makefile | |
| /usr/bin/make[2] (Makefile.connect.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make[2] (Makefile.connssl.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make[2] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make[2] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. | |
| /usr/bin/make[2] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'. | |
| awk: can't open file /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.flat | |
| source line number 1 | |
| WARNING: couldn't find connect/connect in /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.flat | |
| awk: can't open file /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.flat | |
| source line number 1 | |
| WARNING: couldn't find connect/xconnect in /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.flat | |
| awk: can't open file /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.flat | |
| source line number 1 | |
| WARNING: couldn't find connect/xxconnect in /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.flat | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect TMPL=connect -j --jobserver-fds=3,5 all | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/run_with_lock.sh: adjusting base from make_connect to make__connect_common per /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/.#lock-map. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_version.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_base64.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_local.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_lb.c. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_ftp_connector.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_sendmail.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_service_connector.c. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_dispd.c. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_host_info.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_service.c. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_server_info.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_heapmgr.c. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_memory_connector.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_http_connector.c. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_file_connector.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_socket_connector.c. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_connector.c. | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_connection.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_connutil.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_socket.c. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_util.c. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_core.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_priv.c. | |
| brew: superenv removed: -m64brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_types.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_buffer.c. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_ansi_ext.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_lbsmd.c. | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_lbsm_ipc.c. | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| brew: superenv removed: -m64 | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_lbsm.c. | |
| brew: superenv removed: -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_lbsm.c -o ncbi_lbsm.o | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_lbsm_ipc.c -o ncbi_lbsm_ipc.o | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_lbsmd.c -o ncbi_lbsmd.o | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_types.c -o ncbi_types.o | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_priv.c -o ncbi_priv.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_core.c -o ncbi_core.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_util.c -o ncbi_util.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_socket.c -o ncbi_socket.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_connection.c -o ncbi_connection.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_connector.c -o ncbi_connector.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_service.c -o ncbi_service.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_lb.c -o ncbi_lb.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_local.c -o ncbi_local.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_base64.c -o ncbi_base64.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_version.c -o ncbi_version.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /bin/rm -f libconnect.dylib .libconnect.dylib.stamp | |
| /usr/local/Library/ENV/4.3/c++ -m64 -dynamiclib -install_name /usr/local/Cellar/blast/2.2.28/lib/libconnect.dylib -o libconnect.dylib -m64 -flat_namespace -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libdbapi_driver.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libdbapi_driver.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libgui_utils.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libgui_utils.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xloader_genbank.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xloader_genbank.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_id1.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_id1.dylib -dylib_file /usr/local/Cellar/blast/2.2.28/lib/libncbi_xreader_pubseqos.dylib:/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libncbi_xreader_pubseqos.dylib -g -undefined suppress ncbi_lbsm.o ncbi_lbsm_ipc.o ncbi_lbsmd.o ncbi_ansi_ext.o ncbi_buffer.o ncbi_types.o ncbi_priv.o ncbi_core.o ncbi_util.o ncbi_socket.o ncbi_connutil.o ncbi_connection.o ncbi_connector.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_heapmgr.o ncbi_server_info.o ncbi_service.o ncbi_host_info.o ncbi_dispd.o ncbi_service_connector.o ncbi_sendmail.o ncbi_ftp_connector.o ncbi_lb.o ncbi_local.o ncbi_base64.o ncbi_version.o -Wl,-rpath,/usr/local/Cellar/blast/2.2.28/lib -L/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib -lm -Wl,-framework,ApplicationServices | |
| brew: superenv removed: -m64 -m64 -g | |
| /bin/sh /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/scripts/common/impl/if_diff.sh ln -f libconnect.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib | |
| ln -f libconnect.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libconnect.dylib | |
| ln -f .connect.dep /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/.connect.dep | |
| /usr/bin/make -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/build/Makefile.lib.tmpl srcdir=/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect TMPL=connssl -j --jobserver-fds=3,5 all | |
| Updating dependency information for /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_gnutls.c. | |
| brew: superenv removed: -m64 | |
| /usr/local/Library/ENV/4.3/cc -c -Wall -Wno-format-y2k -m64 -fpascal-strings -g -fno-common -D_DEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -m64 -DNCBI_WITHOUT_MT -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/inc -I/private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/include /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o | |
| brew: superenv removed: -Wall -Wno-format-y2k -m64 -g -m64 | |
| /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/src/connect/ncbi_gnutls.c:159:5: error: use of undeclared identifier 'GNUTLS_COMP_LZO'; did you mean 'GNUTLS_COMP_ZLIB'? | |
| GNUTLS_COMP_LZO, | |
| ^~~~~~~~~~~~~~~ | |
| GNUTLS_COMP_ZLIB | |
| /usr/local/include/gnutls/gnutls.h:288:5: note: 'GNUTLS_COMP_ZLIB' declared here | |
| GNUTLS_COMP_ZLIB = GNUTLS_COMP_DEFLATE, | |
| ^ | |
| 1 error generated. | |
| make[3]: *** [ncbi_gnutls.o] Error 1 | |
| FAILED: src/connect/Makefile.connssl.lib | |
| /bin/rm -f libconnssl.dylib .connssl.dep .libconnssl.dylib.stamp | |
| /bin/rm -f /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/lib/libconnssl.dylib /private/tmp/blast-Nt7k/ncbi-blast-2.2.28+-src/c++/GCC421-DebugDLL64/status/.connssl.dep | |
| make[2]: *** [all.nonusr] Error 2 | |
| make[1]: *** [all_r.real] Error 5 | |
| make: *** [all] Error 2 | |
| ==> Configuration | |
| HOMEBREW_VERSION: 0.9.4 | |
| HEAD: 41d4ae5b0d021c3c92039a147c594d699f6c968b | |
| CPU: quad-core 64-bit sandybridge | |
| OS X: 10.8.3-x86_64 | |
| Xcode: 4.6.2 | |
| CLT: 4.6.0.0.1.1365549073 | |
| X11: 2.7.4 => /opt/X11 | |
| ==> ENV | |
| CC: cc | |
| CXX: c++ | |
| MAKEFLAGS: -j4 | |
| CMAKE_PREFIX_PATH: /usr/local | |
| CMAKE_INCLUDE_PATH: /usr/include/libxml2:/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers/ | |
| CMAKE_LIBRARY_PATH: /System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries | |
| PKG_CONFIG_LIBDIR: /usr/lib/pkgconfig:/usr/local/Library/ENV/pkgconfig/10.8 | |
| ACLOCAL_PATH: /usr/local/share/aclocal | |
| OBJC: cc | |
| PATH: /usr/local/Library/ENV/4.3:/usr/bin:/bin:/usr/sbin:/sbin | |
| Error: blast did not build |
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| Warning: Some directories in /usr/local/share/man aren't writable. | |
| This can happen if you "sudo make install" software that isn't managed | |
| by Homebrew. If a brew tries to add locale information to one of these | |
| directories, then the install will fail during the link step. | |
| You should probably `chown` them: | |
| /usr/local/share/man/mann | |
| Warning: Unbrewed dylibs were found in /usr/local/lib. | |
| If you didn't put them there on purpose they could cause problems when | |
| building Homebrew formulae, and may need to be deleted. | |
| Unexpected dylibs: | |
| /usr/local/lib/libgcc_s.1.dylib | |
| /usr/local/lib/libgcc_s.10.4.dylib | |
| /usr/local/lib/libgcc_s.10.5.dylib | |
| /usr/local/lib/libgfortran.2.0.0.dylib | |
| /usr/local/lib/libhistory.5.2.dylib | |
| /usr/local/lib/libmacfuse_i32.2.dylib | |
| /usr/local/lib/libmacfuse_i64.2.dylib | |
| /usr/local/lib/libosxfuse_i32.2.dylib | |
| /usr/local/lib/libosxfuse_i64.2.dylib | |
| /usr/local/lib/libreadline.5.2.dylib | |
| /usr/local/lib/libtcl8.6.dylib | |
| /usr/local/lib/libtk8.6.dylib | |
| /usr/local/lib/libz.1.2.7.dylib | |
| Warning: Unbrewed .la files were found in /usr/local/lib. | |
| If you didn't put them there on purpose they could cause problems when | |
| building Homebrew formulae, and may need to be deleted. | |
| Unexpected .la files: | |
| /usr/local/lib/libgfortran.la | |
| /usr/local/lib/libosxfuse_i32.la | |
| /usr/local/lib/libosxfuse_i64.la | |
| /usr/local/lib/libpng15.la | |
| Warning: Unbrewed .pc files were found in /usr/local/lib/pkgconfig. | |
| If you didn't put them there on purpose they could cause problems when | |
| building Homebrew formulae, and may need to be deleted. | |
| Unexpected .pc files: | |
| /usr/local/lib/pkgconfig/osxfuse.pc | |
| /usr/local/lib/pkgconfig/tcl.pc | |
| /usr/local/lib/pkgconfig/tk.pc | |
| Warning: Unbrewed static libraries were found in /usr/local/lib. | |
| If you didn't put them there on purpose they could cause problems when | |
| building Homebrew formulae, and may need to be deleted. | |
| Unexpected static libraries: | |
| /usr/local/lib/libgfortran.a | |
| /usr/local/lib/libtclstub8.6.a | |
| /usr/local/lib/libtkstub8.6.a | |
| /usr/local/lib/libz.a |
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